Stem-loop pma-mir-147

Accession

MI0017082

Description

Petromyzon marinus pma-mir-147 precursor miRNA

Sequence

ccagggagauuagcggaaucgauuccgcucaaacucgugugaguuucgacugcgaGUGUGCGGAUUUGCUUCUGCCAAucuccucgg
((.((((((((.((((((.(((.(((((....((((((((........)).))))))..))))).))).)))))).)))))))).))

Structure

  a        a      u   u     ucaa      -  gag 
cc gggagauu gcggaa cga uccgc    acucgu gu   u
|| |||||||| |||||| ||| |||||    |||||| ||    
gg uccucuAA CGUCUU GUU AGGCG    UGagcg ca   u
  c        C      C   U     --UG      u  gcu 

Annotation confidence Not enough data

Genome context

GL482676.1: 3574-3660 [+]

Mature pma-miR-147

• Accession: MIMAT0019480
• Description: Petromyzon marinus pma-miR-147 mature miRNA
• Sequence: 56 - GUGUGCGGAUUUGCUUCUGCCAA - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383