Stem-loop pma-mir-193

Accession

MI0017097

Description

Petromyzon marinus pma-mir-193 precursor miRNA

Sequence

gcgucuggugccgggguuucacggugccagccgagccccacagcggaucCACUGGCCCGUAAAGUCCCGACgcccggcgc
(((((.((((.((((((((.((((.(((((..((.((.......)).))..))))))))).)))))))).)))).)))))

Structure

     u    c        c    u     cc  g  cc 
gcguc ggug cgggguuu acgg gccag  ga cc  a
||||| |||| |||||||| |||| |||||  || ||  c
cgcgg ccgC GCCCUGAA UGCC CGGUC  cu gg  a
     c    A        A    -     AC  a  cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-193

• Accession: MIMAT0019499
• Description: Petromyzon marinus pma-miR-193 mature miRNA
• Sequence: 50 - CACUGGCCCGUAAAGUCCCGAC - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383