Stem-loop pma-mir-196b

Accession

MI0017100

Description

Petromyzon marinus pma-mir-196b precursor miRNA

Sequence

ucacguggugUAGGUAGUAUCAUGUUGUUGGGuauuuacaacauccucgacaacgcgucacugccuucaccacgcca
...(((((((.(((((((..(.((((((((((.............)))))))))).)..))))))).)))))))...

Structure

uca       U       AU A          uauuu 
   cguggug AGGUAGU  C UGUUGUUGGG     a
   ||||||| |||||||  | ||||||||||     c
   gcaccac uccguca  g gcaacagcuc     a
acc       u       cu c          cuaca 

Annotation confidence Low

Genome context

Unknown

Mature pma-miR-196b

• Accession: MIMAT0019504
• Description: Petromyzon marinus pma-miR-196b mature miRNA
• Sequence: 11 - UAGGUAGUAUCAUGUUGUUGGG - 32
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383