Stem-loop pma-mir-210

Accession

MI0017110

Description

Petromyzon marinus pma-mir-210 precursor miRNA

Literature search

2 open access papers mention pma-mir-210
(3 sentences)

Sequence

gccguguccggcagcuccugucgcucgcauauuguccgccugucucaGUGUGCGUGUGACAGCGGCUGUcggcugcgcgcc
((((((.(((((((((.(((((((.(((((((((...........))))))))).))))))).))))))))).)))).)).

Structure

-  -    u         c       u         uccg 
 gc cgug ccggcagcu cugucgc cgcauauug    c
 || |||| ||||||||| ||||||| |||||||||    c
 cg gcgu ggcUGUCGG GACAGUG GCGUGUGac    u
c  c    c         C       U         ucug 

Annotation confidence Not enough data

Genome context

ref|NC_046092.1|: 553238-553318 [-]

Mature pma-miR-210-3p

• Accession: MIMAT0019522
• Description: Petromyzon marinus pma-miR-210-3p mature miRNA
• Sequence: 48 - GUGUGCGUGUGACAGCGGCUGU - 69
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383