Stem-loop pma-mir-217a

Accession

MI0017114

Description

Petromyzon marinus pma-mir-217a precursor miRNA

Literature search

1 open access papers mention pma-mir-217a
(1 sentences)

Sequence

uguuguggaUACUGCAUCAGGAACUGAUUGGAuagugauggauugccaucaguucuuaaugcauugucu
......(((((.(((((.((((((((((.((.((((.....)))))))))))))))).))))).)))))

Structure

uguugu     C     C          U  A    g 
      ggaUA UGCAU AGGAACUGAU GG uagu a
      ||||| ||||| |||||||||| || |||| u
      ucugu acgua uucuugacua cc guua g
------     u     a          -  -    g 

Annotation confidence Not enough data

Genome context

ref|NC_046074.1|: 1950980-1951048 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-mir-217a

Mature pma-miR-217a-5p

• Accession: MIMAT0019528
• Description: Petromyzon marinus pma-miR-217a-5p mature miRNA
• Sequence: 10 - UACUGCAUCAGGAACUGAUUGGA - 32
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383