Stem-loop pma-mir-302

Accession

MI0017123

Description

Petromyzon marinus pma-mir-302 precursor miRNA

Literature search

1 open access papers mention pma-mir-302
(22 sentences)

Sequence

uaguccucgccacugcuacccagauagcaguacuugcuguuagaauuaugagccgcagUAAGUGCUUACCUGUUUGGGCAUcagcgguagaggaauu
...((((((((.(((...(((((((((.((((((((((((..............))))))))))))...)))))))))...))).))).)))))...

Structure

uag     -   a   cua         --c            uagaau 
   uccuc gcc cug   cccagauag   aguacuugcugu      u
   ||||| ||| |||   |||||||||   ||||||||||||       
   aggag ugg gac   GGGUUUGUC   UCGUGAAUgacg      a
uua     a   c   UAC         CAU            ccgagu 

Annotation confidence Not enough data

Genome context

ref|NC_046076.1|: 2418130-2418226 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-302

Mature pma-miR-302-3p

• Accession: MIMAT0019538
• Description: Petromyzon marinus pma-miR-302-3p mature miRNA
• Sequence: 59 - UAAGUGCUUACCUGUUUGGGCAU - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383