Stem-loop pma-mir-430f

Accession

MI0017126

Description

Petromyzon marinus pma-mir-430f precursor miRNA

Sequence

uauucuguucacguuuacagcaauuucgagcacucugcuucauuuauaauagCAAGUGCUUUGAUUUUGUUGUGUacgagaaacagacgc
...(((((((.(((.((((((((..(((((((((.((((...........))))))))).))))..)))))))).))).).))))))...

Structure

uau      - a   u        uu    -     c    ucau 
   ucuguu c cgu uacagcaa  ucga gcacu ugcu    u
   |||||| | ||| ||||||||  |||| ||||| ||||    u
   agacaa g gca GUGUUGUU  AGUU CGUGA ACga    a
cgc      a a   U        UU    U     -    uaau 

Annotation confidence Not enough data

Genome context

ref|NW_022638665.1|: 13016-13105 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-430f

Mature pma-miR-430f-3p

• Accession: MIMAT0019541
• Description: Petromyzon marinus pma-miR-430f-3p mature miRNA
• Sequence: 53 - CAAGUGCUUUGAUUUUGUUGUGU - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383