Stem-loop pma-mir-375a

Accession

MI0017127

Description

Petromyzon marinus pma-mir-375a precursor miRNA

Sequence

acgccucgucugcgucACGCCGAGCCCGACGCGCAAUGCUggccgccgcugugcgcgcUUUGUUCGUUCGGCUCGCGUUAcgcaggcggggggc
.(.((((((((((((.((((.(((((.((((.((((.((..(((((....))).)))).)))).)))).))))))))).)))))))))))).).

Structure

a g            c    C     C    C    U  Ug  -   c 
 c ccucgucugcgu ACGC GAGCC GACG GCAA GC  gc cgc g
 | |||||||||||| |||| ||||| |||| |||| ||  || |||  
 g ggggcggacgcA UGCG CUCGG UUGC UGUU cg  cg gug c
c g            U    -     C    U    U  --  c   u 

Annotation confidence Not enough data

Genome context

GL476436.1: 561565-561658 [-]

Mature pma-miR-375a-5p

• Accession: MIMAT0019542
• Description: Petromyzon marinus pma-miR-375a-5p mature miRNA
• Sequence: 17 - ACGCCGAGCCCGACGCGCAAUGCU - 40
• Evidence: experimental ; 454 [1]

Mature pma-miR-375a-3p

• Accession: MIMAT0019543
• Description: Petromyzon marinus pma-miR-375a-3p mature miRNA
• Sequence: 59 - UUUGUUCGUUCGGCUCGCGUUA - 80
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383