Stem-loop pma-let-7a-2

Accession

MI0017145

Description

Petromyzon marinus pma-let-7a-2 precursor miRNA

Literature search

1 open access papers mention pma-let-7a-2
(3 sentences)

Sequence

ugagugcgcccugggaUGAGGUAGUAGGUUGUAUAGUUucagggucacacccaaacugggaguuaacuguacaaucuacucucuuucccaaggcggcacgcug
...(((((((.(((((.((((.((((((((((((((((...((((...)))).((((...)))))))))))))))))))).))))))))).))).))))....

Structure

-uga    -   c     U    U                ---------uca    c 
    gugc gcc uggga GAGG AGUAGGUUGUAUAGUU            gggu  
    |||| ||| ||||| |||| ||||||||||||||||            |||| a
    cacg cgg acccu uucu ucaucuaacaugucaa            ccca  
gucg    g   a     -    c                uugagggucaaa    c 

Annotation confidence Not enough data

Genome context

ref|NC_046114.1|: 5799358-5799460 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-let-7a-2

Mature pma-let-7a-5p

• Accession: MIMAT0019564
• Description: Petromyzon marinus pma-let-7a-5p mature miRNA
• Sequence: 17 - UGAGGUAGUAGGUUGUAUAGUU - 38
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383