Stem-loop pma-let-7a-3

Accession

MI0017146

Description

Petromyzon marinus pma-let-7a-3 precursor miRNA

Sequence

gcgugggaUGAGGUAGUAGGUUGUAUAGUUuggggagugugaccccguucaggagauaacuguacaaucuacugucuugcccaagc
((.((((.(((((((((((((((((((((((((((.......)))))..........)))))))))))))))))))))))))).))

Structure

  g    a                      ----------     ag 
gc uggg UGAGGUAGUAGGUUGUAUAGUU          ugggg  u
|| |||| ||||||||||||||||||||||          |||||  g
cg accc guucugucaucuaacaugucaa          gcccc  u
  a    -                      uagaggacuu     ag 

Annotation confidence Not enough data

Genome context

GL476357.1: 309640-309725 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-let-7a-3

Mature pma-let-7a

• Accession: MIMAT0019564
• Description: Petromyzon marinus pma-let-7a mature miRNA
• Sequence: 9 - UGAGGUAGUAGGUUGUAUAGUU - 30
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383