Stem-loop pma-let-7a-4

Accession

MI0017147

Description

Petromyzon marinus pma-let-7a-4 precursor miRNA

Literature search

1 open access papers mention pma-let-7a-4
(1 sentences)

Sequence

guuuucggggUGAGGUAGUAGGUUGUAUAGUUuagcauuacaccuacggagauaacuguacaaccuucuagcuuuccccgcgggc
((((.(((((.(((.(((.(((((((((((((.....................))))))))))))).))).))).))))).))))

Structure

    u     U   G   U             uagcauuac 
guuu cgggg GAG UAG AGGUUGUAUAGUU         a
|||| ||||| ||| ||| |||||||||||||         c
cggg gcccc uuc auc uccaacaugucaa         c
    c     u   g   u             uagaggcau 

Annotation confidence Not enough data

Genome context

ref|NC_046100.1|: 8235673-8235757 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-let-7a-4

Mature pma-let-7a-5p

• Accession: MIMAT0019564
• Description: Petromyzon marinus pma-let-7a-5p mature miRNA
• Sequence: 11 - UGAGGUAGUAGGUUGUAUAGUU - 32
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383