Stem-loop pma-mir-4542

Accession

MI0017152

Description

Petromyzon marinus pma-mir-4542 precursor miRNA

Sequence

uuuuuggguugacauguCAUGUUCCAUGUUGCACUUCUGugaagaugcuagucaGCAAGUGCAUUUUGGAAUGUGACauguugacuccagucau
...(((((((((((((((((((((((...((((((((((.............))).)))))))...))))))))))))))))))).))))....

Structure

-uuu    -                   UGU       -   ugaag 
    uugg guugacauguCAUGUUCCA   UGCACUU CUG     a
    |||| |||||||||||||||||||   ||||||| |||     u
    gacc caguuguaCAGUGUAAGGU   ACGUGAA Gac     g
uacu    u                   UUU       C   ugauc 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-4542-5p

• Accession: MIMAT0019570
• Description: Petromyzon marinus pma-miR-4542-5p mature miRNA
• Sequence: 18 - CAUGUUCCAUGUUGCACUUCUG - 39
• Evidence: experimental ; 454 [1]

Mature pma-miR-4542-3p

• Accession: MIMAT0019571
• Description: Petromyzon marinus pma-miR-4542-3p mature miRNA
• Sequence: 55 - GCAAGUGCAUUUUGGAAUGUGAC - 77
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383