Stem-loop pma-mir-4545

Accession

MI0017155

Description

Petromyzon marinus pma-mir-4545 precursor miRNA

Sequence

cucgcuccccgccggcCUUCACAACUGGCUGCUUUACuguagaggaaggggUACAGCAUCCAGUUGUGUGAGacgguggugggcucu
...((((.((((((..((((((((((((.((((.((((.(.......).)))).)))).))))))))).))).)))))).))))...

Structure

cuc    c      gc   -         C    U    g ag 
   gcuc ccgccg  CUU CACAACUGG UGCU UACu u  a
   |||| ||||||  ||| ||||||||| |||| |||| |  g
   cggg gguggc  GAG GUGUUGACC ACGA AUgg g  g
ucu    u      -a   U         U    C    g aa 

Annotation confidence Not enough data

Genome context

GL477613.1: 23220-23306 [-]

Mature pma-miR-4545-5p

• Accession: MIMAT0019575
• Description: Petromyzon marinus pma-miR-4545-5p mature miRNA
• Sequence: 17 - CUUCACAACUGGCUGCUUUAC - 37
• Evidence: experimental ; 454 [1]

Mature pma-miR-4545-3p

• Accession: MIMAT0019576
• Description: Petromyzon marinus pma-miR-4545-3p mature miRNA
• Sequence: 52 - UACAGCAUCCAGUUGUGUGAG - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383