Stem-loop pma-mir-4546

Accession

MI0017156

Description

Petromyzon marinus pma-mir-4546 precursor miRNA

Sequence

gggcagcagcAGCAGCAAGUCGGCGUGGAAGGcgauggucgccuucggccuccucgcccuggcucacgccgccuucucugccgcgca
..((.((.((((.((.(((.(((((((((((((((...))))))))((((..........))))))))))).))))))))).)))).

Structure

gg  a  a    C  C   U       ------------------        u 
  gc gc gcAG AG AAG CGGCGUG                  GAAGGcga  
  || || |||| || ||| |||||||                  |||||||| g
  cg cg cguc uc uuc gccgcac                  cuuccgcu  
-a  -  c    -  -   c       ucggucccgcuccuccgg        g 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-4546

• Accession: MIMAT0019577
• Description: Petromyzon marinus pma-miR-4546 mature miRNA
• Sequence: 11 - AGCAGCAAGUCGGCGUGGAAGG - 32
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383