Stem-loop pma-mir-4547

Accession

MI0017157

Description

Petromyzon marinus pma-mir-4547 precursor miRNA

Sequence

augugggcgaguugcgcUGUUUUCUGACAAAGGGUUGGCuugugaacugugucuuccGGCCCAUUGCUAGGAAACAUUGccacuagcccaagc
...(((((.(((.(((.(((((((((.(((.(((((((.....((......))..))))))).))).))))))))).))).))).)))))...

Structure

aug     g   u   c         A   A       Cuugu  ac 
   ugggc agu gcg UGUUUUCUG CAA GGGUUGG     ga  u
   ||||| ||| ||| ||||||||| ||| |||||||     ||   
   acccg uca cGU ACAAAGGAU GUU CCCGGcc     cu  g
cga     a   c   U         C   A       ---uu  gu 

Annotation confidence Low

Genome context

GL490208.1: 4315-4407 [-]

Mature pma-miR-4547-5p

• Accession: MIMAT0019578
• Description: Petromyzon marinus pma-miR-4547-5p mature miRNA
• Sequence: 18 - UGUUUUCUGACAAAGGGUUGGC - 39
• Evidence: experimental ; 454 [1]

Mature pma-miR-4547-3p

• Accession: MIMAT0019579
• Description: Petromyzon marinus pma-miR-4547-3p mature miRNA
• Sequence: 58 - GGCCCAUUGCUAGGAAACAUUG - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383