Stem-loop pma-mir-4549

Accession

MI0017159

Description

Petromyzon marinus pma-mir-4549 precursor miRNA

Sequence

cgggcggcgccgGAGACCGCCACGUGUCUGUGCGCagcgcgacgagcgcagagacggugagcggccugguucgcacu
...((((.(((((.(.(((((((.(((((.(((((..........))))).)))))))).))))))))))))))...

Structure

cgg    c     A A    -   G     G     agcg 
   gcgg gccgG G CCGC CAC UGUCU UGCGC    c
   |||| ||||| | |||| ||| ||||| |||||     
   cgcu ugguc c ggcg gug gcaga acgcg    g
uca    -     - -    a   -     g     agca 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-4549

• Accession: MIMAT0019581
• Description: Petromyzon marinus pma-miR-4549 mature miRNA
• Sequence: 13 - GAGACCGCCACGUGUCUGUGCGC - 35
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383