Stem-loop pma-mir-4551

Accession

MI0017161

Description

Petromyzon marinus pma-mir-4551 precursor miRNA

Sequence

uggagacacguguaacauuagucaacgucuccgucgauugcagucucauugaagacuuuUCGGCCGAAACCUUGACUAACUuuguacguguuuucacc
(((((((((((((((..((((((((.((.((.(((((....(((((......)))))..))))).)).)).))))))))..)))))))))))))))..

Structure

--               ca        c  c  c     uugc     ca 
  uggagacacguguaa  uuagucaa gu uc gucga    agucu  u
  |||||||||||||||  |||||||| || || |||||    |||||   
  acuuuugugcauguu  AAUCAGUU CA AG CGGCU    ucaga  u
cc               UC        C  A  C     --uu     ag 

Annotation confidence Not enough data

Genome context

ref|NC_046121.1|: 2195080-2195177 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-4551

Mature pma-miR-4551-3p

• Accession: MIMAT0019583
• Description: Petromyzon marinus pma-miR-4551-3p mature miRNA
• Sequence: 60 - UCGGCCGAAACCUUGACUAACU - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383