Stem-loop pma-mir-4553

Accession

MI0017163

Description

Petromyzon marinus pma-mir-4553 precursor miRNA

Sequence

aaugguaggugauuauuuugcgucggcguaccuuguacuguAGUGGUAGUGCCUUACGCUGGUagucucuuacucgc
...((((((.(((((((..((((.((((((((............)))).))))..)))).))))))).))))))...

Structure

aau      u       uu    -c    -    uugua 
   gguagg gauuauu  gcgu  ggcg uacc     c
   |||||| |||||||  ||||  |||| ||||      
   ucauuc cugaUGG  CGCA  CCGU AUGG     u
cgc      u       -U    UU    G    UGAug 

Annotation confidence Not enough data

Genome context

ref|NC_046077.1|: 13399574-13399650 [-]

Mature pma-miR-4553-3p

• Accession: MIMAT0019585
• Description: Petromyzon marinus pma-miR-4553-3p mature miRNA
• Sequence: 42 - AGUGGUAGUGCCUUACGCUGGU - 63
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383