Stem-loop pma-mir-4554

Accession

MI0017164

Description

Petromyzon marinus pma-mir-4554 precursor miRNA

Sequence

gacauugcauugUGGGUCACCGUGUUGCAGUGUGgaaacacuuuacggucacccacacugcaacaugguuacucgccaugcaauauu
...(((((((.((((((.(((((((((((((((((....(((....)))...))))))))))))))))).)))))).)))))))...

Structure

gac       u      C                 aaac   u 
   auugcau gUGGGU ACCGUGUUGCAGUGUGg    acu u
   ||||||| |||||| |||||||||||||||||    |||  
   uaacgua cgcuca ugguacaacgucacacc    ugg a
uua       c      u                 -cac   c 

Annotation confidence Not enough data

Genome context

GL476379.1: 351767-351853 [-]

Mature pma-miR-4554

• Accession: MIMAT0019586
• Description: Petromyzon marinus pma-miR-4554 mature miRNA
• Sequence: 13 - UGGGUCACCGUGUUGCAGUGUG - 34
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383