Stem-loop pma-mir-4557

Accession

MI0017167

Description

Petromyzon marinus pma-mir-4557 precursor miRNA

Sequence

gcgucgucucucuguagAAAUGCUUCCAGUGACUGUGUCuggaaaagcccucgcauugccacguuugcuggaagcaagucuauauggagaugggag
...((((((((.((((((..((((((((((((.((((...(.((..((....)).)).))))).))))))))))))..)))))).))))))))...

Structure

gcg        c      AA            C    UCu g  aa  c 
   ucgucucu uguagA  UGCUUCCAGUGA UGUG   g aa  gc c
   |||||||| ||||||  |||||||||||| ||||   | ||  ||  
   gguagagg auaucu  acgaaggucguu gcac   c uu  cg u
gag        u      ga            u    --- g  -a  c 

Annotation confidence Not enough data

Genome context

GL479154.1: 395632-395727 [+]

Mature pma-miR-4557

• Accession: MIMAT0019589
• Description: Petromyzon marinus pma-miR-4557 mature miRNA
• Sequence: 18 - AAAUGCUUCCAGUGACUGUGUC - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383