Stem-loop pma-mir-4560

Accession

MI0017170

Description

Petromyzon marinus pma-mir-4560 precursor miRNA

Sequence

agagcccccgcuguucUCUCUGUCCACACAAACACCUGcucgccaugagacucagguguuucccuggacugggggcagagcgaggggcgag
...(((((((((.(.(((((.(((((...((((((((((((.....)))...)))))))))...))))).))))).).)))).)))))...

Structure

aga     -    g u     U     CAC         ---   g 
   gcccc cgcu u cUCUC GUCCA   AAACACCUG   cuc c
   ||||| |||| | ||||| |||||   |||||||||   ||| c
   cgggg gcga a ggggg caggu   uuuguggac   gag a
gag     a    g c     u     ccc         uca   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-4560

• Accession: MIMAT0019592
• Description: Petromyzon marinus pma-miR-4560 mature miRNA
• Sequence: 17 - UCUCUGUCCACACAAACACCUG - 38
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383