Stem-loop pma-mir-4572

Accession

MI0017182

Description

Petromyzon marinus pma-mir-4572 precursor miRNA

Sequence

gagugcagagcccaucgcugcgucaaggcugcuuacgggagaccucuugccGCUUGCGUCUUGGCUCAGCGGugcgauuugcaaau
...((((((.(.((((((((.((((((((.((...((((((....))).)))...)))))))))).)))))))).).))))))...

Structure

gag      g c        c        u  uua   -   a 
   ugcaga c caucgcug gucaaggc gc   cgg gag c
   |||||| | |||||||| |||||||| ||   ||| |||  
   acguuu g guGGCGAC CGGUUCUG CG   Gcc uuc c
uaa      a c        U        -  UUC   g   u 

Annotation confidence Not enough data

Genome context

GL487722.1: 3531-3616 [+]

Mature pma-miR-4572

• Accession: MIMAT0019605
• Description: Petromyzon marinus pma-miR-4572 mature miRNA
• Sequence: 52 - GCUUGCGUCUUGGCUCAGCGG - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383