Stem-loop pma-mir-4574

Accession

MI0017184

Description

Petromyzon marinus pma-mir-4574 precursor miRNA

Sequence

guucagauGCUGAGAUACACAGUUCGCAGUucauagaagucugccuguugguacgcuguugaacugaguaucucgacaucugccc
...((((((.((((((((.(((((((((((...........((((....)))).)))).))))))).)))))))).))))))...

Structure

guu      C        A       -    ucauagaaguc    u 
   cagauG UGAGAUAC CAGUUCG CAGU           ugcc g
   |||||| |||||||| ||||||| ||||           ||||  
   gucuac gcucuaug gucaagu gucg           augg u
ccc      a        a       u    ----------c    u 

Annotation confidence Not enough data

Genome context

GL477899.1: 8221-8305 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-4574

Mature pma-miR-4574

• Accession: MIMAT0019607
• Description: Petromyzon marinus pma-miR-4574 mature miRNA
• Sequence: 9 - GCUGAGAUACACAGUUCGCAGU - 30
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383