Stem-loop pma-mir-4581

Accession

MI0017191

Description

Petromyzon marinus pma-mir-4581 precursor miRNA

Sequence

guggcugcacgggccagguaaagcgugccgacacggcucggauacggcucGCUCGGAACGGCCCGGCUCGGGUggcagu
...(((((.((((((.(((....(((.((((..((((.((....)))).)).)))).)))))).)))))).)))))...

Structure

gug     a      a   aaag   g    ca  -  u  g 
   gcugc cgggcc ggu    cgu ccga  cg gc cg a
   ||||| |||||| |||    ||| ||||  || || ||  
   cggUG GCUCGG CCG    GCA GGCU  Gc cg gc u
uga     G      C   ----   A    -C  u  -  a 

Annotation confidence Low

Genome context

GL493616.1: 3649-3727 [+]

Mature pma-miR-4581

• Accession: MIMAT0019614
• Description: Petromyzon marinus pma-miR-4581 mature miRNA
• Sequence: 51 - GCUCGGAACGGCCCGGCUCGGGU - 73
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383