Stem-loop pma-mir-4598

Accession

MI0017208

Description

Petromyzon marinus pma-mir-4598 precursor miRNA

Sequence

cuugagguugacaaaugAACGGUUUCGAAUCGAUGUAUAcgaacaauauuucacgcgcugugugucgauucaaagccguacauuugucaacuuucac
...((((((((((((((.(((((((.(((((((((((((((..............)).))))))))))))).))))))).))))))))))))))...

Structure

cuu              A       C             -  aacaau 
   gagguugacaaaug ACGGUUU GAAUCGAUGUAUA cg      a
   |||||||||||||| ||||||| ||||||||||||| ||       
   uuucaacuguuuac ugccgaa cuuagcugugugu gc      u
cac              a       a             c  gcacuu 

Annotation confidence Not enough data

Genome context

ref|NC_046101.1|: 12070162-12070258 [-]

Mature pma-miR-4598-5p

• Accession: MIMAT0019631
• Description: Petromyzon marinus pma-miR-4598-5p mature miRNA
• Sequence: 18 - AACGGUUUCGAAUCGAUGUAUA - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383