miRBase entry: pma-mir-4599a

Stem-loop pma-mir-4599a

Accession

MI0017209

Description

Petromyzon marinus pma-mir-4599a precursor miRNA

Sequence

uaagcugagcCAGCCGCCCGCCACAAUCCCGgucaaguccuauugaccggagauuguccagugguggcuaagagcagugac
...((((..(.((((((((...((((((((((((((......)))))))).))))))...).)))))))..)..))))...

Structure

uaa    ag -C       - GCC      -        gu 
   gcug  c  AGCCGCC C   ACAAUC CCGgucaa  c
   ||||  |  ||||||| |   |||||| ||||||||   
   ugac  g  ucggugg g   uguuag ggccaguu  c
cag    ga aa       u acc      a        au

Annotation confidence Not enough data

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Genome context

GL477453.1: 341342-341422 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-4599a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pma-miR-4599a

Accession	MIMAT0019632
Description	Petromyzon marinus pma-miR-4599a mature miRNA
Sequence	11 - CAGCCGCCCGCCACAAUCCCG - 31
Evidence	experimental 454 [1]

References

PubMed ID: 20959416
microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
"Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
"Proc Natl Acad Sci U S A (2010) 107:19379-19383