Stem-loop pma-mir-4599a

Accession

MI0017209

Description

Petromyzon marinus pma-mir-4599a precursor miRNA

Sequence

uaagcugagcCAGCCGCCCGCCACAAUCCCGgucaaguccuauugaccggagauuguccagugguggcuaagagcagugac
...((((..(.((((((((...((((((((((((((......)))))))).))))))...).)))))))..)..))))...

Structure

uaa    ag -C       - GCC      -        gu 
   gcug  c  AGCCGCC C   ACAAUC CCGgucaa  c
   ||||  |  ||||||| |   |||||| ||||||||   
   ugac  g  ucggugg g   uguuag ggccaguu  c
cag    ga aa       u acc      a        au 

Annotation confidence Not enough data

Genome context

ref|NC_046096.1|: 11004270-11004350 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-4599a

Mature pma-miR-4599a-5p

• Accession: MIMAT0019632
• Description: Petromyzon marinus pma-miR-4599a-5p mature miRNA
• Sequence: 11 - CAGCCGCCCGCCACAAUCCCG - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383