Stem-loop pma-mir-4599b

Accession

MI0017210

Description

Petromyzon marinus pma-mir-4599b precursor miRNA

Sequence

cguguugagGUAGCCGCCCGCCACAGUCACAgucucacacccuuugacuggcgauuguccagugguggcuaagaucaauguc
...(((((..(((((((((...((((((.(((((...........)))))..))))))...).))))))))...)))))...

Structure

cgu     -gG        - GCC      -A     ucac 
   guuga   UAGCCGCC C   ACAGUC  CAguc    a
   |||||   |||||||| |   ||||||  |||||    c
   uaacu   aucggugg g   uguuag  gucag    c
cug     aga        u acc      cg     uuuc 

Annotation confidence Low

Genome context

GL477453.1: 339630-339711 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pma-mir-4599b

Mature pma-miR-4599b

• Accession: MIMAT0019633
• Description: Petromyzon marinus pma-miR-4599b mature miRNA
• Sequence: 10 - GUAGCCGCCCGCCACAGUCACA - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383