Stem-loop pma-mir-4600

Accession

MI0017211

Description

Petromyzon marinus pma-mir-4600 precursor miRNA

Sequence

ggcacagagaAACGUCGCCCCCGCUCCCCCGcucgcgagggaguggugcgggcgacccuccuguaua
...((((.((...(((((((((((((((.((....)).))))))))...)))))))..))))))...

Structure

ggc    a  AAC       ---        C  c 
   acag ga   GUCGCCC   CCGCUCCC CG u
   |||| ||   |||||||   |||||||| ||  
   uguc cu   cagcggg   ggugaggg gc c
aua    -  -cc       cgu        a  g 

Annotation confidence Not enough data

Genome context

ref|NC_046071.1|: 7111802-7111868 [+]

Mature pma-miR-4600-5p

• Accession: MIMAT0019634
• Description: Petromyzon marinus pma-miR-4600-5p mature miRNA
• Sequence: 11 - AACGUCGCCCCCGCUCCCCCG - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383