Stem-loop pma-mir-4605

Accession

MI0017216

Description

Petromyzon marinus pma-mir-4605 precursor miRNA

Sequence

gcagcagugGAUAGACACUGGCUGACGACGAcgacgcacgugcuccuacucucguaaucagccagcgugcauccacugcggg
...(((((((((..((.((((((((..((((.((.((....))......))))))..)))))))).))..)))))))))...

Structure

gca         AG  A        CG    c  -----c  a 
   gcagugGAU  AC CUGGCUGA  ACGA ga      gc c
   |||||||||  || ||||||||  |||| ||      ||  
   cgucaccua  ug gaccgacu  ugcu cu      cg g
ggg         cg  c        aa    -  cauccu  u 

Annotation confidence Not enough data

Genome context

GL477647.1: 47937-48018 [-]

Mature pma-miR-4605

• Accession: MIMAT0019639
• Description: Petromyzon marinus pma-miR-4605 mature miRNA
• Sequence: 10 - GAUAGACACUGGCUGACGACGA - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383