Stem-loop pma-mir-4620

Accession

MI0017231

Description

Petromyzon marinus pma-mir-4620 precursor miRNA

Sequence

gagacacgcggagUAGGGGCAGCGGUGGCACCGACGgagacgccugcguccuccccgccgugccgcccugcugugcgugugau
...(((((((.((((((((((.((((((....((((.((....)).))))....)))))))))..))))))).)))))))...

Structure

gag       g       --   G      CACC    g  a 
   acacgcg agUAGGG  GCA CGGUGG    GACG ag c
   ||||||| |||||||  ||| ||||||    |||| ||  
   ugugcgu ucguccc  cgu gccgcc    cugc uc g
uag       g       gc   -      ccuc    g  c 

Annotation confidence Not enough data

Genome context

GL487652.1: 4426-4508 [+]

Mature pma-miR-4620

• Accession: MIMAT0019654
• Description: Petromyzon marinus pma-miR-4620 mature miRNA
• Sequence: 14 - UAGGGGCAGCGGUGGCACCGACG - 36
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383