Stem-loop pma-mir-4628

Accession

MI0017239

Description

Petromyzon marinus pma-mir-4628 precursor miRNA

Sequence

ggcaguacaggguguuucaaaaagaugggcccgauuuuaaaucgcuauaucucugcaauuGGGUCCAUCGUCUUGAAAUACCuuguauuucc
((.(((((((((((((((((...(((((((((((((.......((.........)))))))))))))))...))))))))))))))))).))

Structure

  c                 aaa             uuaaauc  uau 
gg aguacaggguguuucaa   gaugggcccgauu       gc   a
|| |||||||||||||||||   |||||||||||||       ||   u
cc uuauguuCCAUAAAGUU   CUACCUGGGuuaa       cg   c
  u                 CUG             -------  ucu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-4628

• Accession: MIMAT0019662
• Description: Petromyzon marinus pma-miR-4628 mature miRNA
• Sequence: 61 - GGGUCCAUCGUCUUGAAAUACC - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383