Dead hairpin entry

Stem-loop osa-MIR812m

Accession

MI0017247

Description

Oryza sativa osa-MIR812m precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

10 open access papers mention osa-MIR812m
(16 sentences)

Sequence

243359 reads, 1042.0 reads per million, 142 experiments

agucauacguuuccgcguccaACUUUGAUCGUCCGUCUUAUUUGAaauuuuuuuauaauuaguauuuuuguuguuaugagauaauaaaauaugaauaguacuuuacucgugacuuauguuuuuaauuuuuuuuaaaaaaaauucAAAUAAGACGAACGGUUAAAGUUGgacgcggaaaacuauagcu
(((.(((..(((((((((((((((((((((((.(((((((((((((.((((((((.((..(((.........((((((((....((((.(((.....))).))))))))))))...........)))..)).)))))))).))))))))))))).)))))))))))))))))))))))..))).)))

Structure

   c   cg                       C             a        u  uu   --auuuuuguu        auaa    a   g 
agu aua  uuuccgcguccaACUUUGAUCGU CGUCUUAUUUGAa uuuuuuua aa  agu           guuaugag    uaaa uau a
||| |||  ||||||||||||||||||||||| ||||||||||||| |||||||| ||  |||           ||||||||    |||| ||| a
ucg uau  aaaggcgcagGUUGAAAUUGGCA GCAGAAUAAAcuu aaaaaaau uu  uua           cagugcuc    auuu aug u
   a   ca                       A             a        u  uu   auuuuuguauu        ----    c   a