Dead hairpin entry

Stem-loop osa-MIR812o

Accession

MI0017255

Description

Oryza sativa osa-MIR812o precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

9 open access papers mention osa-MIR812o
(15 sentences)

Sequence

49767 reads, 183.0 reads per million, 142 experiments

gguuUUCGUGUUCAACGUUUGACUgucuaucuuauaugaaaauuuuuuuauuaguauuuuuauuauuguuagaugauaaaacaugaauaauacuuuaugcaugacuuaucuuuuuaauuuuuuucauaauuuuuuuaaauaaaaugaacggucAAAUGUUAGACACGGAAACu
((((((((((((.(((((((((((((.(((.((((.((((((..((.....(((((....)))))..((((((.(((((..((((.((((....)))).))))..)))))..)))))).........))..)))))).)))).))).))))))))))))).))))))))))))

Structure

            C             c   c    a      uu  uuuauuaguauuuuuauuauu      -u     aa    a    u 
gguuUUCGUGUU AACGUUUGACUgu uau uuau ugaaaa  uu                     guuaga  gauaa  caug auaa a
|||||||||||| ||||||||||||| ||| |||| ||||||  ||                     ||||||  |||||  |||| ||||  
uCAAAGGCACAG UUGUAAAcuggca gua aaua auuuuu  aa                     uaauuu  cuauu  guac uauu c
            A             a   a    a      uu  ------------uacuuuuuu      uu     ca    g    u