Stem-loop tcc-MIR156g

Accession

MI0017459

Description

Theobroma cacao tcc-MIR156g precursor miRNA

Gene family

MIPF0000008; MIR156

Sequence

cauucuugggacauagaaauUGACAGAAGAGAGUGAGCACacagaggcacuuguauaagucuauacuuuugcuuuugcgugcucacuucucuuucugucagcuuccagugccggaauuug
.(((((.((.((...(((.(((((((((((((((((((((.((((((((...(((((....)))))...)))))))).)))))))).)))).))))))))).)))..)).)))))))...

Structure

--c     u  g  aua   a         -    -        a        cuu     a 
   auucu gg ac   gaa uUGACAGAA GAGA GUGAGCAC cagaggca   guaua g
   ||||| || ||   ||| ||||||||| |||| |||||||| ||||||||   |||||  
   uaagg cc ug   cuu gacugucuu cucu cacucgug guuuucgu   cauau u
guu     -  g  -ac   c         u    u        c        uuu     c 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR156g

• Accession: MIMAT0020375
• Description: Theobroma cacao tcc-miR156g mature miRNA
• Sequence: 21 - UGACAGAAGAGAGUGAGCAC - 40
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108