Stem-loop tcc-MIR166a

Accession

MI0017467

Description

Theobroma cacao tcc-MIR166a precursor miRNA

Gene family

MIPF0000004; MIR166

Sequence

uauaacaucaacuguugaggggaauguugucugguucgaagucauucauaugaaucuuaaaugucuucugaaugauuUCGGACCAGGCUUCAUUCCCCccaacuuguuuuaauagcua
.........(((.((((.((((((((..((((((((((((((((((((...(((.(......)..)))))))))))))))))))))))..)))))))).))))..)))..........

Structure

-uauaacauc   -u    a        uu                    uau   -u uu 
          aac  guug ggggaaug  gucugguucgaagucauuca   gaa  c  a
          |||  |||| ||||||||  ||||||||||||||||||||   |||  |   
          uug  caac CCCCUUAC  CGGACCAGGCUuuaguaagu   cuu  g  a
aucgauaauu   uu    c        UU                    ---   cu ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR166a

• Accession: MIMAT0020383
• Description: Theobroma cacao tcc-miR166a mature miRNA
• Sequence: 78 - UCGGACCAGGCUUCAUUCCCC - 98
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108