Stem-loop tcc-MIR166d

Accession

MI0017470

Description

Theobroma cacao tcc-MIR166d precursor miRNA

Gene family

MIPF0000004; MIR166

Sequence

gaagucuugaacaguugaggggaaugcugucugguucgagaccguucauuugaagcucuagacuucaucagaaugaucUCGGACCAGGCUUCAUUCCCCccaacuuauggaauauauac
....(((.....(((((.((((((((..(((((((((((((.(((((...(((((.......)))))...))))).)))))))))))))..)))))))).)))))...)))........

Structure

----gaag   ugaac     a        cu             c     auu     cu 
        ucu     aguug ggggaaug  gucugguucgaga cguuc   ugaag  c
        |||     ||||| ||||||||  ||||||||||||| |||||   |||||  u
        agg     ucaac CCCCUUAC  CGGACCAGGCUcu guaag   acuuc  a
cauauaua   --uau     c        UU             a     acu     ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR166d

• Accession: MIMAT0020386
• Description: Theobroma cacao tcc-miR166d mature miRNA
• Sequence: 79 - UCGGACCAGGCUUCAUUCCCC - 99
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108