Stem-loop tcc-MIR169l

Accession

MI0017486

Description

Theobroma cacao tcc-MIR169l precursor miRNA

Sequence

gagagguagagaauuuagugCAGCCAAGGAUGACUUGCCGGcguagacaauacucaaauacuaauuauuauuguauuuuuccggcaagucuguccuuggcuacauugguuucucuucuucuc
((((((.((((((.((((((.((((((((((((((((((((.....((((((................))))))......)))))))))).)))))))))).)))))).)))))).))))))

Structure

      u      u      C          -          -cguag      cucaaau 
gagagg agagaa uuagug AGCCAAGGAU GACUUGCCGG      acaaua       a
|||||| |||||| |||||| |||||||||| ||||||||||      ||||||        
cucuuc ucucuu gguuac ucgguuccug cugaacggcc      uguuau       c
      u      u      a          u          uuuuua      uauuaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR169l

• Accession: MIMAT0020402
• Description: Theobroma cacao tcc-miR169l mature miRNA
• Sequence: 21 - CAGCCAAGGAUGACUUGCCGG - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108