Stem-loop tcc-MIR169n

Accession

MI0017488

Description

Theobroma cacao tcc-MIR169n precursor miRNA

Sequence

aaagggagggagugggggcuUGAGUCAAGAAUGACUUGCCGguguuugcuucuuggcaggcauuaauuaagccggcucaccggccuuaaccuaguccuccggcaaguuguucuuggcucaccuucgcucucuuuucuuucau
((((((((((((((((((..((((((((((((((((((((((((((((((....))))))))....(((((((((....)))).))))).........))))))))))))))))))))))))))))))).)))))))))...

Structure

---         -         cu                      uguuugcuucuuggcaggcauuaa     -    c 
   aaagggagg gaguggggg  UGAGUCAAGAAUGACUUGCCGg                        uuaag ccgg u
   ||||||||| |||||||||  ||||||||||||||||||||||                        ||||| ||||  
   uuucuuuuc cucgcuucc  acucgguucuuguugaacggcc                        aauuc ggcc c
uac         u         --                      ---------------uccugaucc     c    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR169n

• Accession: MIMAT0020404
• Description: Theobroma cacao tcc-miR169n mature miRNA
• Sequence: 21 - UGAGUCAAGAAUGACUUGCCG - 41
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108