Stem-loop tcc-MIR394a

Accession

MI0017507

Description

Theobroma cacao tcc-MIR394a precursor miRNA

Sequence

agggcuucuuacagaguuuaUUGGCAUUCUGUCCACCUCCcaucacagaaaaucccuuuccuuuccccucucuuucauggaggugggcauacugccaacugggcucuguuggcuucucuu
((((...((.((((((((((((((((...(((((((((((......(((.....................))).....)))))))))))...)))))).)))))))))).))...)))).

Structure

-    cuu  u          -      UUC           caucac   aaaucccuu 
 aggg   cu acagaguuua UUGGCA   UGUCCACCUCC      aga         u
 ||||   || |||||||||| ||||||   |||||||||||      |||         c
 ucuc   gg ugucucgggu aaccgu   acggguggagg      ucu         c
u    uuc  u          c      cau           -uacuu   cuccccuuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR394a

• Accession: MIMAT0020423
• Description: Theobroma cacao tcc-miR394a mature miRNA
• Sequence: 21 - UUGGCAUUCUGUCCACCUCC - 40
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108