Stem-loop tcc-MIR399f

Accession

MI0017524

Description

Theobroma cacao tcc-MIR399f precursor miRNA

Sequence

uguggaguugaggaauuacagagcaauucuccuucagcacaaaugcuuaugcuccuucauaguucuauuuUGCCAGAGGAGAUUUGCCCUGccauucacucacacaaugau
((((((((....((((..(((.((((.(((((((..(((.(((((.(((((......)))))...))))))))..))))))).)))).)))..)))))))).)))).....

Structure

-----    -    ugag    ua   a    u       ca   c     --c     cu 
     ugug gagu    gaau  cag gcaa ucuccuu  gca aaaug   uuaug  c
     |||| ||||    ||||  ||| |||| |||||||  ||| |||||   |||||   
     acac cuca    cuua  GUC CGUU AGAGGAG  CGU uuuau   gauac  c
uagua    a    ----    cc   C    U       AC   -     cuu     uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR399f

• Accession: MIMAT0020440
• Description: Theobroma cacao tcc-miR399f mature miRNA
• Sequence: 71 - UGCCAGAGGAGAUUUGCCCUG - 91
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108