Stem-loop tcc-MIR399g

Accession

MI0017525

Description

Theobroma cacao tcc-MIR399g precursor miRNA

Sequence

ugugcaguugacgaauaacagugcaguccuucuuuggcacagagaagacauggcauacgugacuucuguuuUGCCAAAGGAGAAUUGCCCUGccauucauuccugcaguuac
..(((((..((.((((..(((.(((((.(((((((((((.(.(((((.((((.....)))).))))).)..))))))))))).))))).)))..)))).)).))))).....

Structure

---ug     uu  c    aa   u     c           -c g     a    g 
     ugcag  ga gaau  cag gcagu cuucuuuggca  a agaag caug c
     |||||  || ||||  ||| ||||| |||||||||||  | ||||| |||| a
     acguc  uu cuua  GUC CGUUA GAGGAAACCGU  u ucuuc gugc u
cauug     -c  a    cc   C     A           uu g     a    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcc-miR399g

• Accession: MIMAT0020441
• Description: Theobroma cacao tcc-miR399g mature miRNA
• Sequence: 72 - UGCCAAAGGAGAAUUGCCCUG - 92
• Evidence: not_experimental

References

1. PubMed ID: 21186351
   The genome of Theobroma cacao
   "Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sal"
   "Nat Genet (2011) 43:101-108