Stem-loop cel-mir-4805

Accession

MI0017535

Description

Caenorhabditis elegans cel-mir-4805 precursor miRNA

Sequence

83 reads, 1 reads per million, 12 experiments

agucggaggcaggggugUGCGGCAAAUUUGCCGAAUUUGCcguuugucgagcucggcAAAUUUUGAGAUUUUCCGCACAccccugaucggagcc
..((.((..(((((((((((((.((((((.(.((((((((((...........)))))))))).))))))).))))))))))))).)).))...

Structure

-ag  g  gg             C      G C          uuug 
   uc ga  caggggugUGCGG AAAUUU C GAAUUUGCcg    u
   || ||  ||||||||||||| |||||| | ||||||||||    c
   ag cu  guccccACACGCC UUUAGA G UUUAAAcggc    g
ccg  g  -a             U      - U          ucga 

Annotation confidence Medium

Genome context

chrII: 1061648-1061741 [+]

Mature cel-miR-4805-5p

• Accession: MIMAT0019986
• Description: Caenorhabditis elegans cel-miR-4805-5p mature miRNA
• Sequence: 18 - UGCGGCAAAUUUGCCGAAUUUGC - 40
• Evidence: experimental ; Illumina [1]

Mature cel-miR-4805-3p

• Accession: MIMAT0019987
• Description: Caenorhabditis elegans cel-miR-4805-3p mature miRNA
• Sequence: 58 - AAAUUUUGAGAUUUUCCGCACA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21085120
   Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs
   "Jan CH, Friedman RC, Ruby JG, Bartel DP"
   "Nature (2011) 469:97-101