Stem-loop dme-mir-4917

Accession

MI0017700

Description

Drosophila melanogaster dme-mir-4917 precursor miRNA

Sequence

98 reads, 3.0 reads per million, 23 experiments

GUGAGUAGCGAUGGGGGUCAGauggccguggaagauaugugacgauugcccccuUACUACUAUCGUCUGCUCAACAg
.(((((((((((((.(((.((..((((((.(........).)))...)))..)).))).)))))).)))))))....

Structure

---G       -      G   C  au   ---   g aag 
    UGAGUAG CGAUGG GGU AG  ggc   cgu g   a
    ||||||| |||||| ||| ||  |||   ||| |    
    ACUCGUC GCUAUC UCA uc  ccg   gca u   u
gACA       U      A   U  cc   uua   g gua 

Annotation confidence High

Genome context

chrX: 14199545-14199621 [+]

Mature dme-miR-4917-5p

• Accession: MIMAT0053355
• Description: Drosophila melanogaster dme-miR-4917-5p mature miRNA
• Sequence: 1 - GUGAGUAGCGAUGGGGGUCAG - 21
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4917-3p

• Accession: MIMAT0020511
• Description: Drosophila melanogaster dme-miR-4917-3p mature miRNA
• Sequence: 55 - UACUACUAUCGUCUGCUCAACA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177960
   Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
   "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
   "Genome Res (2011) 21:286-300