Stem-loop dme-mir-4919

Accession

MI0017702

Description

Drosophila melanogaster dme-mir-4919 precursor miRNA

Literature search

1 open access papers mention dme-mir-4919
(2 sentences)

Sequence

1430 reads, 11 reads per million, 37 experiments

GUGAGUCUCUAGGGGAUUAGCaagcuauaauuucucacuUAAUCCCUGAACGACUUGCAG
(((((((....(((((((((..................)))))))))....)))))))..

Structure

--       UCUA         Caagcuau 
  GUGAGUC    GGGGAUUAG        a
  |||||||    |||||||||         
  CGUUCAG    UCCCUAAUu        a
GA       CAAG         cacucuuu 

Annotation confidence High

Genome context

chr2R: 15945887-15945946 [+]

Mature dme-miR-4919-5p

• Accession: MIMAT0020513
• Description: Drosophila melanogaster dme-miR-4919-5p mature miRNA
• Sequence: 1 - GUGAGUCUCUAGGGGAUUAGC - 21
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4919-3p

• Accession: MIMAT0032117
• Description: Drosophila melanogaster dme-miR-4919-3p mature miRNA
• Sequence: 40 - UAAUCCCUGAACGACUUGCAG - 60
• Evidence: not_experimental

References

1. PubMed ID: 21177960
   Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
   "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
   "Genome Res (2011) 21:286-300