miRBase entry: dme-mir-4909

Stem-loop dme-mir-4909


Accession
MI0017704
Description
Drosophila melanogaster dme-mir-4909 precursor miRNA


Sequence

139 reads, 6 reads per million, 21 experiments
guagguugaaaucggauacaacuaaaaguuauuuuuaAUUGUAUCCGGUCUUCAUUUUAG
.((((.(((((((((((((((.(((((.....))))).))))))))))).)))).)))).

Structure
g    u    -           c     g 
 uagg ugaa aucggauacaa uaaaa u
 |||| |||| ||||||||||| ||||| u
 AUUU ACUU UGGCCUAUGUU auuuu a
G    U    C           A     u 


Annotation confidence Not enough data
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Genome context
chr2R: 7711417-7711476 [+]

Database links

Mature dme-miR-4909-3p

Accession MIMAT0020515
Description Drosophila melanogaster dme-miR-4909-3p mature miRNA
Sequence 38 - AUUGUAUCCGGUCUUCAUUUUAG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177960
    Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
    "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
    "Genome Res (2011) 21:286-300