Stem-loop cel-mir-4925

Accession

MI0017712

Description

Caenorhabditis elegans cel-mir-4925 precursor miRNA

Sequence

17 reads, 0 reads per million, 4 experiments

guaagugcauauguuucaaaaacuuguucaaauuguUUUCGAAAACAUUGCAUUUACAG
(((((((((.(((((((.(((((...........))))).).)))))))))))))))..

Structure

--         u      - a     uugu 
  guaagugca auguuu c aaaac    u
  ||||||||| |||||| | |||||    c
  CAUUUACGU UACAAA G UUUug    a
GA         -      A C     uuaa 

Annotation confidence Not enough data

Genome context

chrX: 1879562-1879620 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cel-mir-4925

Mature cel-miR-4925

• Accession: MIMAT0020132
• Description: Caenorhabditis elegans cel-miR-4925 mature miRNA
• Sequence: 37 - UUUCGAAAACAUUGCAUUUACAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177960
   Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
   "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
   "Genome Res (2011) 21:286-300