miRBase entry: cel-mir-4927

Stem-loop cel-mir-4927


Accession
MI0017714
Description
Caenorhabditis elegans cel-mir-4927 precursor miRNA


Sequence

790 reads, 9.0 reads per million, 44 experiments
GUGGGUUUUUUCAAAAUUUUUUuaauuaaauaaAAAAAUUUGGAAAAAAGUUCCAG
.(((((((((((.(((((((((((......))))))))))).)))))))..)))).

Structure
G    --       A           au 
 UGGG  UUUUUUC AAAUUUUUUua  u
 ||||  ||||||| |||||||||||   
 ACCU  AAAAAAG UUUAAAAAaau  a
G    UG       G           aa 


Annotation confidence Medium
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Genome context
chrIII: 3507205-3507260 [-]

Database links

Mature cel-miR-4927-5p

Accession MIMAT0020134
Description Caenorhabditis elegans cel-miR-4927-5p mature miRNA
Sequence 1 - GUGGGUUUUUUCAAAAUUUUUU - 22
Evidence experimental
Illumina [1]

Mature cel-miR-4927-3p

Accession MIMAT0053612
Description Caenorhabditis elegans cel-miR-4927-3p mature miRNA
Sequence 34 - AAAAAUUUGGAAAAAAGUUCCAG - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21177960
    Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans
    "Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC"
    "Genome Res (2011) 21:286-300