miRBase entry: cel-mir-4936

Stem-loop cel-mir-4936


Accession
MI0017722
Description
Caenorhabditis elegans cel-mir-4936 precursor miRNA


Sequence

1096 reads, 7 reads per million, 13 experiments
uauacgcuaucgagauaauaagcauuuauggcuacaauguauacgccucucaaaauuacguucacauUGCUUUGUGGCUUUGCUGGUAacucuuuugccuuucacgcaac
...........(((.((...((((.....(((((((((((..(((.............)))..)))).....))))))).))))..)).)))..((((.......)))).

Structure
-------uauacgcuauc   a  aua    uuuau       -----    au   ccucu 
                  gag ua   agca     ggcuaca     augu  acg     c
                  ||| ||   ||||     |||||||     ||||  |||     a
                  cuc AU   UCGU     UCGGUGU     uaca  ugc     a
caacgcacuuuccguuuu   a  -GG    ----U       UUCGU    cu   auuaa 


Annotation confidence Not enough data
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Genome context
chrIII: 3249151-3249260 [+]

Database links

Mature cel-miR-4936

Accession MIMAT0020142
Description Caenorhabditis elegans cel-miR-4936 mature miRNA
Sequence 68 - UGCUUUGUGGCUUUGCUGGUA - 88
Evidence experimental
454 [1]
Database links

References

  1. PubMed ID: 21129974
    MicroRNAs both promote and antagonize longevity in C. elegans
    "de Lencastre A, Pincus Z, Zhou K, Kato M, Lee SS, Slack FJ"
    "Curr Biol (2010) 20:2159-2168