Stem-loop dme-mir-4951

Accession

MI0017737

Description

Drosophila melanogaster dme-mir-4951 precursor miRNA

Sequence

7475 reads, 137 reads per million, 46 experiments

uuuucguacguacaaaaaagcaucagguuuUCGGGUGAGGUUUCUGAUGCUuugucucuuaaguuuuuccuaacaauuaaacccuaugucgguauuacgaauaCCAUCAAAAAACCUCACCCACCAaauguaugaccagagagauaaaaa
...((((((((......((((.....))))..(((((((((((.(((((.(((((.......(((......)))......(((.......)))...)))))...)))))..))))))))))).....))))))))...............

Structure

------------uuu        acaaaaaagcaucagguuuUC           -C     --C     cucuuaaguuuuuccuaac 
               ucguacgu                     GGGUGAGGUUU  UGAUG   Uuugu                   a
               ||||||||                     |||||||||||  |||||   |||||                   a
               aguaugua                     CCCACUCCAAA  ACUAC   aagca                   u
aaaaauagagagacc        ----------------aACCA           AA     Cau     uuauggcuguaucccaaau 

Annotation confidence High

Genome context

chr3R: 21316716-21316865 [+]

Mature dme-miR-4951-5p

• Accession: MIMAT0020164
• Description: Drosophila melanogaster dme-miR-4951-5p mature miRNA
• Sequence: 31 - UCGGGUGAGGUUUCUGAUGCU - 51
• Evidence: experimental ; Illumina [1]

Mature dme-miR-4951-3p

• Accession: MIMAT0020165
• Description: Drosophila melanogaster dme-miR-4951-3p mature miRNA
• Sequence: 104 - CCAUCAAAAAACCUCACCCACCA - 126
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215