Stem-loop dme-mir-4953

Accession

MI0017739

Description

Drosophila melanogaster dme-mir-4953 precursor miRNA

Sequence

5 reads, 6 reads per million, 4 experiments

uaaaguucacaggcgaccaugaauguuaauaaagaauauuuaccaauaaaguuuuaUUUUUUAUUGAAGGUCAUGGACAuccuugaaccgauu
....(((((.(((...((((((...(((((((((((((................)))))))))))))...))))))....)))))))).....

Structure

-uaaa     c   -cga      aug             uuuacca 
     guuca agg    ccauga   uuaauaaagaaua       a
     ||||| |||    ||||||   |||||||||||||        
     caagu ucc    GGUACU   AGUUAUUUUUUau       u
uuagc     -   uACA      GGA             uuugaaa 

Annotation confidence Not enough data

Genome context

chr3R: 22774140-22774232 [+]

Mature dme-miR-4953-3p

• Accession: MIMAT0020168
• Description: Drosophila melanogaster dme-miR-4953-3p mature miRNA
• Sequence: 57 - UUUUUUAUUGAAGGUCAUGGACA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21177969
   Deep annotation of Drosophila melanogaster microRNAs yields insights into their processing, modification, and emergence
   "Berezikov E, Robine N, Samsonova A, Westholm JO, Naqvi A, Hung JH, Okamura K, Dai Q, Bortolamiol-Becet D, Martin R, Zhao Y, Zamore PD, Hannon GJ, Marra MA, Weng Z, Perrimon N, Lai EC"
   "Genome Res (2011) 21:203-215